Miyakogusa Predicted Gene

Lj0g3v0133469.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL G7IR11_MEDTR 261 49.7 60.0 (tr|G7IR11) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_2g075470 PE=4 SV=1

TAIR_pep AT1G53460.1 172 37.4 54.1 | Symbols: | BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT1G70650.2); Has 485 Blast hits to 413 proteins in 88 species: Archae - 11; Bacteria - 27; Metazoa - 119; Fungi - 17; Plants - 101; Viruses - 2; Other Eukaryotes - 208 (source: NCBI BLink). | chr1:19954558-19956509 REVERSE LENGTH=314

Medicago Medtr2g075470.1 261 49.7 60.0 | plant/T3F20-21 protein, putative | HC | chr2:31567796-31564591 | 20130731

Soybean Glyma13g34190.1 247 50.7 61.6

LJGI gnl|LJGI|TC61020 1855 99.3 99.3 weakly similar to UniRef100_A7P228 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (38%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj0g3v0133469.1 length: 318 aa.

no_ID

method AccNumber shortName E-value location

Coil coil coiled-coil NA 83-104

Seg seg seg NA 69-83
85-96

Wolf-PSORT

Lj0g3v0133469.1 chlo 6, mito 3.5, nucl 3, cyto_mito 2.5

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0133469.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	G7IR11_MEDTR	261	49.7	60.0	(tr\|G7IR11) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_2g075470 PE=4 SV=1
TAIR_pep	AT1G53460.1	172	37.4	54.1	\| Symbols: \| BEST Arabidopsis thaliana protein match is: Ran BP2/NZF zinc finger-like superfamily protein (TAIR:AT1G70650.2); Has 485 Blast hits to 413 proteins in 88 species: Archae - 11; Bacteria - 27; Metazoa - 119; Fungi - 17; Plants - 101; Viruses - 2; Other Eukaryotes - 208 (source: NCBI BLink). \| chr1:19954558-19956509 REVERSE LENGTH=314
Medicago	Medtr2g075470.1	261	49.7	60.0	\| plant/T3F20-21 protein, putative \| HC \| chr2:31567796-31564591 \| 20130731
Soybean	Glyma13g34190.1	247	50.7	61.6
LJGI	gnl\|LJGI\|TC61020	1855	99.3	99.3	weakly similar to UniRef100_A7P228 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (38%)

no_ID
Lj0g3v0133469.1				length: 318 aa.
method	AccNumber	shortName	E-value	location
Coil	coil	coiled-coil	NA	83-104
Seg	seg	seg	NA	69-83 85-96