Miyakogusa Predicted Gene

Lj0g3v0132789.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LPI8_SOYBN 244 70.5 78.6 (tr|K7LPI8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G12920.1 168 44.8 63.4 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr5:4077917-4082585 REVERSE LENGTH=537
Medicago Medtr4g066000.1 226 67.6 77.5 | transducin/WD40 domain protein | HC | chr4:24861062-24870017 | 20130731
Soybean --No_Hits--        
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0132789.1 length: 204 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMSmart SM00320 WD40 5.1 58-93
97-137
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 2.6e-12 12-163
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 10.285 61-146
no_ID  
HMMPanther PTHR22850 WD40 6.9e-20 1-148
HMMPanther PTHR22850:SF40 HYPOTHETICAL 6.9e-20 1-148
superfamily SSF75011 3-carboxy-cis,cis-mucoante 3.9e-13 25-150
Wolf-PSORT
Lj0g3v0132789.1	nucl 8, cyto 2, mito 2, extr 1, pero 1, chlo_mito 1, cyto_mito 1, mito_plas 1, cyto_E.R. 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0132789.1