Miyakogusa Predicted Gene

Lj0g3v0132579.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7L068_SOYBN 563 70.1 78.0 (tr|K7L068) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G20960.1 394 56.9 72.5 | Symbols: | Cytidine/deoxycytidylate deaminase family protein | chr4:11212077-11213530 FORWARD LENGTH=426
Medicago Medtr4g119220.1 542 74.3 82.4 | riboflavin biosynthesis protein RibD | HC | chr4:49364638-49361029 | 20130731
Soybean Glyma03g01270.1 556 68.9 76.4  
LJGI gnl|LJGI|TC73559 1348 99.9 99.9 similar to UniRef100_A7PZD5 Cluster: Chromosome chr15 scaffold_40, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr15 scaffold_40, whole genome shotgun sequence - Vitis vinifera (Grape), partial (66%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0132579.1 length: 426 aa.
IPR002125 CMP/dCMP deaminase, zinc-binding
method AccNumber shortName E-value location
Molecular Function GO:0008270 zinc ion binding    
Molecular Function GO:0016787 hydrolase activity    
HMMPfam PF00383 dCMP_cyt_deam_1 2e-20 75-169
IPR004794 Riboflavin biosynthesis protein RibD
Molecular Function GO:0008835 diaminohydroxyphosphoribosylaminopyrimidine deaminase activity    
Biological Process GO:0009231 riboflavin biosynthetic process    
Biological Process GO:0055114 oxidation-reduction process    
HMMTigr TIGR00326 eubact_ribD: 1.3e-72 77-372
IPR016192 APOBEC/CMP deaminase, zinc-binding
Molecular Function GO:0008270 zinc ion binding    
Molecular Function GO:0016787 hydrolase activity    
PatternScan PS00903 CYT_DCMP_DEAMINASES NA 119-157
IPR016193 Cytidine deaminase-like
Molecular Function GO:0003824 catalytic activity    
superfamily SSF53927 Cytidine 1.2e-50 71-215
IPR024072 Dihydrofolate reductase-like domain
Gene3D G3DSA:3.40.430.10 no description 9.8e-18 198-423
superfamily SSF53597 Dihydrofolate 6.6e-08 216-425
no_ID  
Gene3D G3DSA:3.40.140.10 no description 5.6e-28 72-197
HMMPanther PTHR11079 CYTOSINE 2.4e-93 64-416
HMMPanther PTHR11079:SF10 RIBOFLAVIN-SPECIFIC 2.4e-93 64-416
Seg seg seg NA 30-43
187-198
Wolf-PSORT
Lj0g3v0132579.1	chlo 12, nucl 1, cyto 1, cyto_nucl 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0132579.1