| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | K7LX83_SOYBN | 902 | 67.9 | 75.9 | (tr|K7LX83) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep | AT4G12640.1 | 549 | 49.0 | 64.2 | | Symbols: | RNA recognition motif (RRM)-containing protein | chr4:7462697-7467630 FORWARD LENGTH=823 |
| Medicago | Medtr3g079310.1 | 969 | 71.5 | 78.5 | | RNA recognition motif (RRM) containing protein | HC | chr3:35657324-35668580 | 20130731 |
| Soybean | Glyma13g03840.1 | 760 | 67.3 | 74.5 | |
| LJGI | gnl|LJGI|TC70858 | 872 | 99.6 | 99.6 | similar to UniRef100_Q6ID24 Cluster: At4g12630; n=2; Arabidopsis thaliana|Rep: At4g12630 - Arabidopsis thaliana (Mouse-ear cress), partial (65%) |
| Lj0g3v0132489.1 | length: 737 aa. | |||
| IPR000504 | RNA recognition motif domain | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0003676 | nucleic acid binding | ||
| HMMPfam | PF00076 | RRM_1 | 1.9e-08 | 51-114 |
| HMMSmart | SM00360 | RNA | 3.1e-07 | 50-117 180-248 |
| ProfileScan | PS50102 | RRM | 11.725 | 49-121 179-252 |
| IPR012677 | Nucleotide-binding, alpha-beta plait | |||
| Molecular Function | GO:0000166 | nucleotide binding | ||
| Gene3D | G3DSA:3.30.70.330 | no description | 3.2e-13 | 37-129 168-254 |
| IPR012921 | Spen paralogue and orthologue SPOC, C-terminal | |||
| HMMPfam | PF07744 | SPOC | 1.8e-07 | 507-602 |
| no_ID | ||||
| HMMPanther | PTHR23189 | RNA | 2.2e-160 | 43-651 |
| HMMPanther | PTHR23189:SF32 | RNA | 2.2e-160 | 43-651 |
| HMMPfam | PF13893 | RRM_5 | 9.5e-09 | 196-250 |
| Seg | seg | seg | NA | 21-44 128-140 165-175 252-269 319-330 |
| superfamily | SSF54928 | RNA-binding | 1.1e-24 | 46-259 |
Lj0g3v0132489.1 nucl 8.5, cyto_nucl 5.5, mito 2, cyto 1.5, chlo_mito 1.5, mito_plas 1.5
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj0g3v0132489.1 |