Miyakogusa Predicted Gene

Lj0g3v0132459.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7J6L9_MEDTR 1124 85.9 91.3 (tr|G7J6L9) Beta-D-glucosidase OS=Medicago truncatula GN=MTR_3g079750 PE=1 SV=1
TAIR_pep AT5G20950.2 931 75.8 85.4 | Symbols: | Glycosyl hydrolase family protein | chr5:7107609-7110775 REVERSE LENGTH=624
Medicago Medtr3g079750.1 1124 85.9 91.3 | glycoside hydrolase family 3 protein | HC | chr3:35989730-35994962 | 20130731
Soybean Glyma10g15980.1 1077 84.4 90.6  
LJGI gnl|LJGI|TC80250 2290 99.7 99.7 similar to UniRef100_Q7XAS3 Cluster: Beta-D-glucosidase; n=1; Gossypium hirsutum|Rep: Beta-D-glucosidase - Gossypium hirsutum (Upland cotton) (Gossypium mexicanum), partial (60%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0132459.1 length: 630 aa.
IPR001764 Glycoside hydrolase, family 3, N-terminal
method AccNumber shortName E-value location
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
FPrintScan PR00133 GLHYDRLASE3 1e-24 111-127
135-154
181-197
227-243
297-315
Gene3D G3DSA:3.20.20.300 no description 1.3e-120 29-394
HMMPfam PF00933 Glyco_hydro_3 1.4e-88 50-378
IPR002772 Glycoside hydrolase family 3 C-terminal domain
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
Gene3D G3DSA:3.40.50.1700 no description 7.5e-66 401-624
HMMPfam PF01915 Glyco_hydro_3_C 1.3e-43 415-624
superfamily SSF52279 Beta-D-glucan 6.6e-59 415-624
IPR017853 Glycoside hydrolase, superfamily
superfamily SSF51445 (Trans)glycosidases 1e-129 27-414
IPR026892 Glycoside hydrolase family 3
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
HMMPanther PTHR30620 PERIPLASMIC 2.1e-254 26-624
no_ID  
HMMPanther PTHR30620:SF0 PERIPLASMIC 2.1e-254 26-624
Seg seg seg NA 13-19
426-434
461-474
Putative transmembrane regions
  From To
TM segments
SOSUI		 4 26
Wolf-PSORT
Lj0g3v0132459.1	chlo 7, E.R. 3, extr 2, cyto_E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0132459.1