Miyakogusa Predicted Gene
- Lj0g3v0132409.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1N002_SOYBN |
247 |
72.8 |
81.6 |
(tr|I1N002) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT2G29940.1 |
205 |
60.0 |
74.8 |
| Symbols: PDR3, ATPDR3 | pleiotropic drug resistance 3 | chr2:12760139-12766455 FORWARD LENGTH=1426 |
| Medicago |
Medtr3g463680.1 |
229 |
68.4 |
79.1 |
| ABC-2 and plant PDR ABC-type transporter family protein | HC | chr3:25528512-25520345 | 20130731 |
| Soybean |
Glyma18g07080.1 |
247 |
72.8 |
81.6 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0132409.1 |
length: 158 aa. |
| IPR013525 |
ABC-2 type transporter |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0016020 |
membrane |
|
|
| HMMPfam |
PF01061 |
ABC2_membrane |
2.1e-21 |
28-155 |
| no_ID |
|
| HMMPanther |
PTHR19241 |
ATP-BINDING |
1.3e-65 |
5-155 |
| HMMPanther |
PTHR19241:SF10 |
ATP-BINDING |
1.3e-65 |
5-155 |
| Seg |
seg |
seg |
NA |
141-151 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
51 |
73 |
| 128 |
150 |
- Wolf-PSORT
Lj0g3v0132409.1 chlo 5.5, chlo_mito 4, nucl 3, cyto 3, cyto_nucl 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0132409.1 |
|