Miyakogusa Predicted Gene

Lj0g3v0132109.1

Related links:

GeneModel
LORE1 insertion

Predicted Sequence Links:

Translated sequence
Nucleotide sequence

Genome Sequence: Lj3.0_chr0

Full length sequence(192322135 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL --No_Hits--

TAIR_pep --No_Hits--

Medicago --No_Hits--

Soybean --No_Hits--

LJGI gnl|LJGI|TC70191 143 97.5 97.5 similar to UniRef100_A3KQ56 Cluster: Hairy-related 1; n=1; Danio rerio|Rep: Hairy-related 1 - Danio rerio (Zebrafish) (Brachydanio rerio), partial (6%)

Putative transmembrane regions

From To

TM segments
SOSUI 25 47

58 80

Wolf-PSORT

Lj0g3v0132109.1 chlo 6, nucl 2, plas 2, extr 2, nucl_plas 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj0g3v0132109.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	--No_Hits--
TAIR_pep	--No_Hits--
Medicago	--No_Hits--
Soybean	--No_Hits--
LJGI	gnl\|LJGI\|TC70191	143	97.5	97.5	similar to UniRef100_A3KQ56 Cluster: Hairy-related 1; n=1; Danio rerio\|Rep: Hairy-related 1 - Danio rerio (Zebrafish) (Brachydanio rerio), partial (6%)