Miyakogusa Predicted Gene
- Lj0g3v0131439.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1J6K4_SOYBN |
1057 |
84.2 |
91.1 |
(tr|I1J6K4) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT1G68560.1 |
961 |
75.8 |
86.0 |
| Symbols: ATXYL1, XYL1, TRG1 | alpha-xylosidase 1 | chr1:25734435-25737897 REVERSE LENGTH=915 |
| Medicago |
Medtr1g110980.1 |
1052 |
84.3 |
91.3 |
| alpha-glucosidase | HC | chr1:50113081-50108965 | 20130731 |
| Soybean |
Glyma08g31890.1 |
1057 |
83.4 |
91.1 |
|
| LJGI |
gnl|LJGI|AV407393 |
313 |
87.2 |
87.2 |
weakly similar to UniRef100_Q9LEC9 Cluster: Alpha-glucosidase; n=1; Solanum tuberosum|Rep: Alpha-glucosidase - Solanum tuberosum (Potato), partial (10%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0131439.1 |
length: 638 aa. |
| IPR000322 |
Glycoside hydrolase, family 31 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004553 |
hydrolase activity, hydrolyzing O-glycosyl compounds |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| HMMPanther |
PTHR22762 |
ALPHA-GLUCOSIDASE |
5e-287 |
32-620 |
| HMMPfam |
PF01055 |
Glyco_hydro_31 |
7.5e-116 |
272-624 |
| PatternScan |
PS00129 |
GLYCOSYL_HYDROL_F31_1 |
NA |
444-451 |
| IPR011013 |
Galactose mutarotase-like domain |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| Molecular Function |
GO:0030246 |
carbohydrate binding |
|
|
| superfamily |
SSF74650 |
Galactose |
4.6e-40 |
15-279 |
| IPR013785 |
Aldolase-type TIM barrel |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Gene3D |
G3DSA:3.20.20.70 |
no description |
0.00015 |
536-588 |
| IPR017853 |
Glycoside hydrolase, superfamily |
| superfamily |
SSF51445 |
(Trans)glycosidases |
3.9e-72 |
281-627 |
| no_ID |
|
| HMMPanther |
PTHR22762:SF9 |
ALPHA-GLUCOSIDASE |
5e-287 |
32-620 |
| Seg |
seg |
seg |
NA |
10-23 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
3 |
25 |
- Wolf-PSORT
Lj0g3v0131439.1 chlo 8, nucl 1, cyto 1, plas 1, extr 1, E.R. 1, pero 1, cyto_nucl 1, nucl_plas 1, cyto_pero 1, E.R._plas 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0131439.1 |
|