Miyakogusa Predicted Gene

Lj0g3v0130529.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SRU7_LOTJA 195 100.0 100.0 (tr|I3SRU7) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1
TAIR_pep AT4G02840.1 184 93.9 96.9 | Symbols: | Small nuclear ribonucleoprotein family protein | chr4:1264726-1266253 FORWARD LENGTH=116
Medicago Medtr7g094680.1 194 99.0 99.0 | small nuclear ribonucleoprotein | HC | chr7:37778374-37781262 | 20130731
Soybean Glyma18g52210.1 186 97.0 99.0  
LJGI gnl|LJGI|TC70827 696 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0130529.1 length: 116 aa.
IPR001163 Ribonucleoprotein LSM domain
method AccNumber shortName E-value location
HMMPfam PF01423 LSM 5.7e-17 6-70
IPR006649 Ribonucleoprotein LSM domain, eukaryotic/archaea-type
HMMSmart SM00651 snRNP 3.1e-17 5-70
IPR010920 Like-Sm (LSM) domain
superfamily SSF50182 Sm-like 1.7e-23 3-116
IPR027141 U6 snRNA-associated Sm-like protein LSm4/Small nuclear ribonucleoprotein Sm D1/D3
HMMPanther PTHR23338 SMALL 9.5e-64 1-116
no_ID  
Gene3D G3DSA:2.30.30.100 no description 3.6e-30 1-81
Seg seg seg NA 100-116
Wolf-PSORT
Lj0g3v0130529.1	cyto 9, nucl 2, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0130529.1