Miyakogusa Predicted Gene

Lj0g3v0129989.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL M5XGK1_PRUPE 770 65.7 79.2 (tr|M5XGK1) Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002596mg PE=4 SV=1
TAIR_pep AT1G03560.1 728 61.5 76.6 | Symbols: | Pentatricopeptide repeat (PPR-like) superfamily protein | chr1:890428-892410 REVERSE LENGTH=660
Medicago Medtr8g054410.2 904 77.3 86.8 | PPR containing plant-like protein | HC | chr8:19775422-19777359 | 20130731
Soybean Glyma10g41170.1 744 66.0 77.9  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0129989.1 length: 560 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.5 96-123
129-155
234-263
408-438
482-498
515-536
HMMPfam PF13041 PPR_2 6.1e-17 160-208
266-314
336-384
HMMTigr TIGR00756 PPR: 7.3e-06 128-162
163-197
198-229
234-266
268-302
303-326
338-371
373-404
408-442
ProfileScan PS51375 PPR 5.196 91-125
126-160
161-195
196-230
231-265
266-300
336-370
301-335
371-405
406-440
441-475
478-509
510-544
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 7.4e-11 241-495
no_ID  
HMMPanther PTHR24015 FAMILY 3.1e-139 30-506
HMMPanther PTHR24015:SF0 SUBFAMILY 3.1e-139 30-506
Seg seg seg NA 57-67
superfamily SSF48452 TPR-like 0.00035 231-330
superfamily SSF81901 HCP-like 2e-07 301-545
Wolf-PSORT
Lj0g3v0129989.1	E.R. 4, plas 3, E.R._vacu 3, cyto_E.R. 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0129989.1