Miyakogusa Predicted Gene
- Lj0g3v0129869.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SE04_LOTJA |
333 |
100.0 |
100.0 |
(tr|I3SE04) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
--No_Hits--
|
|
|
|
|
| Medicago |
Medtr8g091310.1 |
238 |
71.1 |
81.1 |
| glycoside hydrolase family 5 protein | HC | chr8:38090191-38086958 | 20130731 |
| Soybean |
Glyma05g31460.1 |
253 |
73.6 |
84.3 |
|
| LJGI |
gnl|LJGI|GO008403 |
567 |
100.0 |
100.0 |
similar to UniRef100_A7R1E3 Cluster: Chromosome undetermined scaffold_349, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_349, whole genome shotgun sequence - Vitis vinifera (Grape), partial (12%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0129869.1 |
length: 172 aa. |
| IPR008999 |
Actin cross-linking |
| method |
AccNumber |
shortName |
E-value |
location |
| superfamily |
SSF50405 |
Actin-crosslinking |
3e-11 |
78-166 |
| IPR010431 |
Fascin |
| Molecular Function |
GO:0030674 |
protein binding, bridging |
|
|
| Molecular Function |
GO:0051015 |
actin filament binding |
|
|
| HMMPanther |
PTHR10551 |
FASCIN |
8.3e-40 |
47-172 |
| IPR013781 |
Glycoside hydrolase, catalytic domain |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| Gene3D |
G3DSA:3.20.20.80 |
no description |
9.2e-12 |
40-81 |
| IPR017853 |
Glycoside hydrolase, superfamily |
| superfamily |
SSF51445 |
(Trans)glycosidases |
2e-06 |
39-82 |
| no_ID |
|
| Gene3D |
G3DSA:2.80.10.50 |
no description |
5.7e-10 |
82-166 |
| HMMPanther |
PTHR10551:SF6 |
OS10G0370800 |
8.3e-40 |
47-172 |
- Wolf-PSORT
Lj0g3v0129869.1 chlo 7, E.R. 2, nucl 1, cyto 1, mito 1, extr 1, vacu 1, cyto_nucl 1, E.R._plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0129869.1 |
|