Miyakogusa Predicted Gene
- Lj0g3v0129669.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
database |
Accession |
Score |
Iden (%) |
Posi (%) |
Definition |
TrEMBL |
I1KV23_SOYBN |
61.6 |
82.9 |
91.4 |
(tr|I1KV23) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
TAIR_pep |
AT1G15210.1 |
52.0 |
65.7 |
82.9 |
| Symbols: PDR7, ATPDR7 | pleiotropic drug resistance 7 | chr1:5231552-5236573 REVERSE LENGTH=1442 |
Medicago |
Medtr2g101090.1 |
53.1 |
68.6 |
82.9 |
| drug resistance transporter-like ABC domain protein | HC | chr2:43466377-43454358 | 20130731 |
Soybean |
Glyma08g21540.1 |
61.6 |
82.9 |
91.4 |
|
LJGI |
gnl|LJGI|TC78548 |
272 |
99.3 |
99.3 |
similar to UniRef100_Q9XIE2 Cluster: Pleiotropic drug resistance protein 8; n=1; Arabidopsis thaliana|Rep: Pleiotropic drug resistance protein 8 - Arabidopsis thaliana (Mouse-ear cress), partial (10%) |
- A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0129669.1 |
length: 55 aa. |
IPR013525 |
ABC-2 type transporter |
method |
AccNumber |
shortName |
E-value |
location |
Cellular Component |
GO:0016020 |
membrane |
|
|
HMMPfam |
PF01061 |
ABC2_membrane |
7e-10 |
1-55 |
no_ID |
|
HMMPanther |
PTHR19241 |
ATP-BINDING |
1.1e-20 |
1-55 |
HMMPanther |
PTHR19241:SF10 |
ATP-BINDING |
1.1e-20 |
1-55 |
Seg |
seg |
seg |
NA |
36-54 |
- Wolf-PSORT
Lj0g3v0129669.1 cyto 6, chlo 3, mito 3, cyto_nucl 3, chlo_mito 3, cyto_E.R. 3, cyto_plas 3
- PTS1 (Peroxisome targeting signal type 1)
entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
Lj0g3v0129669.1 |
|