Miyakogusa Predicted Gene

Lj0g3v0129619.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MQB5_SOYBN 215 96.3 97.2 (tr|I1MQB5) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT5G35530.1 177 78.9 86.2 | Symbols: | Ribosomal protein S3 family protein | chr5:13710355-13712192 REVERSE LENGTH=248
Medicago Medtr1g023000.1 214 97.2 98.1 | 40S ribosomal S3-like protein | HC | chr1:7280350-7278985 | 20130731
Soybean Glyma16g33240.1 215 96.3 97.2  
LJGI gnl|LJGI|TC70085 654 100.0 100.0 homologue to UniRef100_A7PDZ8 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0129619.1 length: 108 aa.
IPR001351 Ribosomal protein S3, C-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
Gene3D G3DSA:3.30.1140.32 no description 1.5e-20 1-67
HMMPfam PF00189 Ribosomal_S3_C 1.3e-15 2-62
superfamily SSF54821 Ribosomal 1.6e-18 1-67
IPR018280 Ribosomal protein S3, conserved site
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
PatternScan PS00548 RIBOSOMAL_S3 NA 21-57
no_ID  
HMMPanther PTHR11760 30S/40S 1.1e-57 1-94
HMMPanther PTHR11760:SF9 40S 1.1e-57 1-94
Wolf-PSORT
Lj0g3v0129619.1	cyto 7, chlo 2, extr 2, nucl 1, mito 1, E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0129619.1