Miyakogusa Predicted Gene

Lj0g3v0129189.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7L2P1_MEDTR 582 71.6 80.7 (tr|G7L2P1) Protein TRANSPARENT TESTA OS=Medicago truncatula GN=MTR_7g087410 PE=4 SV=1
TAIR_pep AT1G33110.1 459 57.5 71.6 | Symbols: | MATE efflux family protein | chr1:12005084-12008618 FORWARD LENGTH=494
Medicago Medtr7g087410.1 582 71.6 80.7 | MATE efflux family protein | HC | chr7:34003763-34007636 | 20130731
Soybean Glyma03g00790.1 577 72.3 81.0  
LJGI gnl|LJGI|TC58593 965 100.0 100.0 similar to UniRef100_A7Q9Z0 Cluster: Chromosome chr8 scaffold_68, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_68, whole genome shotgun sequence - Vitis vinifera (Grape), partial (46%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0129189.1 length: 398 aa.
IPR002528 Multi antimicrobial extrusion protein
method AccNumber shortName E-value location
Biological Process GO:0006855 drug transmembrane transport    
Molecular Function GO:0015238 drug transmembrane transporter activity    
Molecular Function GO:0015297 antiporter activity    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF01554 MatE 5.1e-35 1-113
177-335
HMMTigr TIGR00797 matE: 2.3e-56 1-349
no_ID  
HMMPanther PTHR11206 MULTIDRUG 1.1e-197 1-393
HMMPanther PTHR11206:SF21 MATE 1.1e-197 1-393
Seg seg seg NA 235-250
251-271
Putative transmembrane regions
  From To
TM segments
SOSUI		 32 54
62 84
92 114
124 146
170 192
213 235
243 265
284 306
318 340
348 370
Wolf-PSORT
Lj0g3v0129189.1	plas 5, vacu 5, E.R. 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0129189.1