Miyakogusa Predicted Gene
- Lj0g3v0128849.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1MM64_SOYBN |
924 |
83.4 |
91.4 |
(tr|I1MM64) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT3G56640.1 |
794 |
70.0 |
85.9 |
| Symbols: SEC15A | exocyst complex component sec15A | chr3:20981964-20984336 FORWARD LENGTH=790 |
| Medicago |
Medtr1g087380.1 |
872 |
78.6 |
88.8 |
| exocyst complex component sec15B | HC | chr1:39166053-39163611 | 20130731 |
| Soybean |
Glyma03g22300.1 |
835 |
77.9 |
84.2 |
|
| LJGI |
gnl|LJGI|CB828526 |
238 |
82.4 |
82.4 |
weakly similar to UniRef100_A7PTC2 Cluster: Chromosome chr8 scaffold_29, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_29, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0128849.1 |
length: 523 aa. |
| IPR007225 |
Exocyst complex subunit Sec15-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0000145 |
exocyst |
|
|
| Biological Process |
GO:0006904 |
vesicle docking involved in exocytosis |
|
|
| HMMPanther |
PTHR12702 |
SEC15 |
2.2e-182 |
1-523 |
| HMMPfam |
PF04091 |
Sec15 |
4.2e-82 |
177-488 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
405-416 |
- Wolf-PSORT
Lj0g3v0128849.1 chlo 5, nucl 5, cyto 2, plas 1, cysk 1, cyto_pero 1, cysk_plas 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0128849.1 |
|