Miyakogusa Predicted Gene

Lj0g3v0128599.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SJ91_LOTJA 371 100.0 100.0 (tr|I3SJ91) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT4G14660.1 276 71.2 85.3 | Symbols: NRPE7 | RNA polymerase Rpb7-like, N-terminal domain | chr4:8406500-8407036 REVERSE LENGTH=178
Medicago Medtr1g475140.1 309 82.2 89.4 | DNA-directed RNA polymerase II subunit Rpb7-like protein | HC | chr1:33201883-33201326 | 20130731
Soybean Glyma20g34690.1 320 83.9 91.1  
LJGI gnl|LJGI|TC75379 1078 100.0 100.0 similar to UniRef100_A7NX05 Cluster: Chromosome chr5 scaffold_2, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome chr5 scaffold_2, whole genome shotgun sequence - Vitis vinifera (Grape), partial (91%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0128599.1 length: 180 aa.
IPR005576 RNA polymerase Rpb7, N-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003899 DNA-directed RNA polymerase activity    
Biological Process GO:0006351 transcription, DNA-dependent    
Gene3D G3DSA:3.30.1490.120 no description 4.4e-14 1-86
HMMPfam PF03876 SHS2_Rpb7-N 1.6e-05 22-81
superfamily SSF88798 N-terminal, 8.6e-14 1-81
IPR012340 Nucleic acid-binding, OB-fold
Gene3D G3DSA:2.40.50.140 no description 1.6e-21 87-175
superfamily SSF50249 Nucleic 4.3e-14 83-175
no_ID  
HMMPanther PTHR12709 DNA-DIRECTED 2.2e-53 2-175
HMMPanther PTHR12709:SF1 DNA-DIRECTED 2.2e-53 2-175
Wolf-PSORT
Lj0g3v0128599.1	chlo 7, cyto 3, mito 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0128599.1