Miyakogusa Predicted Gene
- Lj0g3v0128389.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
F6HBW0_VITVI |
159 |
52.4 |
63.1 |
(tr|F6HBW0) Putative uncharacterized protein OS=Vitis vinifera GN=VIT_09s0018g00780 PE=4 SV=1 |
| TAIR_pep |
AT2G34930.1 |
84.7 |
31.9 |
50.0 |
| Symbols: | disease resistance family protein / LRR family protein | chr2:14737169-14739886 REVERSE LENGTH=905 |
| Medicago |
Medtr4g040360.1 |
198 |
60.8 |
72.9 |
| LRR receptor-like kinase family protein | HC | chr4:14471559-14468431 | 20130731 |
| Soybean |
Glyma16g31340.1 |
124 |
42.4 |
56.4 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0128389.1 |
length: 167 aa. |
| IPR025875 |
Leucine rich repeat 4 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF12799 |
LRR_4 |
8.5e-09 |
22-62 |
| no_ID |
|
| Gene3D |
G3DSA:3.80.10.10 |
no description |
2e-31 |
113-165 |
| HMMPanther |
PTHR24420 |
FAMILY |
9.1e-37 |
2-166 |
| HMMPfam |
PF13855 |
LRR_8 |
3.2e-07 |
114-165 |
| Seg |
seg |
seg |
NA |
21-34 |
| superfamily |
SSF52058 |
L |
1.7e-27 |
2-165 |
- Wolf-PSORT
Lj0g3v0128389.1 nucl 8, cyto 2, extr 2, cysk 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0128389.1 |
|