Miyakogusa Predicted Gene

Lj0g3v0127649.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7VQC2_MAIZE 169 100.0 100.0 (tr|K7VQC2) Histone H4 OS=Zea mays GN=ZEAMMB73_313798 PE=3 SV=1
TAIR_pep AT5G59970.1 162 100.0 100.0 | Symbols: | Histone superfamily protein | chr5:24146352-24146663 REVERSE LENGTH=103
Medicago Medtr4g128150.1 164 100.0 100.0 | core histone H2A/H2B/H3/H4 | LC | chr4:53328594-53330943 | 20130731
Soybean Glyma13g21050.1 163 100.0 100.0  
LJGI gnl|LJGI|TC70944 618 100.0 100.0 homologue to UniRef100_UPI000050340F Cluster: Histone H4 [Contains: Osteogenic growth peptide (OGP)].; n=1; Rattus norvegicus|Rep: Histone H4 [Contains: Osteogenic growth peptide (OGP)]. - Rattus norvegicus, complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0127649.1 length: 103 aa.
IPR001951 Histone H4
method AccNumber shortName E-value location
Cellular Component GO:0000786 nucleosome    
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006334 nucleosome assembly    
FPrintScan PR00623 HISTONEH4 2.2e-63 5-16
20-39
40-60
62-76
77-89
89-100
HMMPanther PTHR10484 HISTONE 1.5e-105 1-103
HMMSmart SM00417 Histone 2e-29 16-90
IPR007125 Histone core
Molecular Function GO:0003677 DNA binding    
HMMPfam PF00125 Histone 2.2e-14 28-94
IPR009072 Histone-fold
Molecular Function GO:0046982 protein heterodimerization activity    
Gene3D G3DSA:1.10.20.10 no description 1.5e-57 2-103
superfamily SSF47113 Histone-fold 6.8e-31 1-101
IPR019809 Histone H4, conserved site
Cellular Component GO:0000786 nucleosome    
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006334 nucleosome assembly    
PatternScan PS00047 HISTONE_H4 NA 15-19
no_ID  
Seg seg seg NA 3-21
Wolf-PSORT
Lj0g3v0127649.1	nucl 9, cyto 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0127649.1