Miyakogusa Predicted Gene

Lj0g3v0127549.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1N743_SOYBN 477 59.0 67.1 (tr|I1N743) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G40470.1 256 44.7 62.1 | Symbols: | RNI-like superfamily protein | chr5:16208255-16209745 REVERSE LENGTH=496
Medicago Medtr7g033720.1 546 62.2 71.5 | F-box/LRR protein | HC | chr7:12311206-12312946 | 20130731
Soybean Glyma19g12410.1 477 59.0 67.1  
LJGI gnl|LJGI|TC75522 1302 99.0 99.0 similar to UniRef100_A7PM36 Cluster: Chromosome chr14 scaffold_21, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_21, whole genome shotgun sequence - Vitis vinifera (Grape), partial (38%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0127549.1 length: 468 aa.
IPR001810 F-box domain, cyclin-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 0.00018 5-40
HMMSmart SM00256 A 0.0044 5-45
IPR006553 Leucine-rich repeat, cysteine-containing subtype
HMMSmart SM00367 Leucine-rich 33 92-116
305-330
360-385
386-411
412-437
no_ID  
Gene3D G3DSA:3.80.10.10 no description 1e-22 4-278
279-453
HMMPanther PTHR23125 F-BOX/LEUCINE 4e-30 7-446
HMMPfam PF13516 LRR_6 0.064 306-328
Seg seg seg NA 19-26
41-86
281-298
superfamily SSF52047 RNI-like 2.1e-20 84-453
Wolf-PSORT
Lj0g3v0127549.1	nucl 5, chlo 4, cyto 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0127549.1