Miyakogusa Predicted Gene

Lj0g3v0127459.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T6K8_LOTJA 324 86.0 86.0 (tr|I3T6K8) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G07580.1 117 71.4 90.0 | Symbols: | Integrase-type DNA-binding superfamily protein | chr5:2399525-2400349 FORWARD LENGTH=274
Medicago Medtr1g090290.1 185 52.3 62.8 | ethylene response factor | LC | chr1:40445065-40444472 | 20130731
Soybean Glyma10g33810.1 221 56.9 66.2  
LJGI gnl|LJGI|TC72635 1187 99.8 99.8 similar to UniRef100_Q75UJ5 Cluster: ERF-like protein; n=1; Cucumis melo|Rep: ERF-like protein - Cucumis melo (Muskmelon), partial (49%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0127459.1 length: 200 aa.
IPR001471 AP2/ERF domain
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
FPrintScan PR00367 ETHRSPELEMNT 4.1e-13 110-121
149-169
Gene3D G3DSA:3.30.730.10 no description 1.6e-30 109-168
HMMPfam PF00847 AP2 3.3e-16 109-159
HMMSmart SM00380 DNA-binding 1.2e-34 109-173
ProfileScan PS51032 AP2_ERF 24.882 109-167
IPR016177 DNA-binding, integrase-type
Molecular Function GO:0003677 DNA binding    
superfamily SSF54171 DNA-binding 2.5e-24 108-170
no_ID  
HMMPanther PTHR31677 FAMILY 3.9e-24 74-172
Seg seg seg NA 34-49
107-116
Wolf-PSORT
Lj0g3v0127459.1	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0127459.1