Miyakogusa Predicted Gene
- Lj0g3v0126529.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1KUQ0_SOYBN |
290 |
77.6 |
91.2 |
(tr|I1KUQ0) Lipoxygenase OS=Glycine max PE=3 SV=1 |
| TAIR_pep |
AT1G55020.1 |
221 |
58.8 |
78.8 |
| Symbols: LOX1, ATLOX1 | lipoxygenase 1 | chr1:20525798-20530143 FORWARD LENGTH=859 |
| Medicago |
Medtr8g018735.1 |
296 |
81.8 |
91.8 |
| seed linoleate 9S-lipoxygenase | HC | chr8:6459438-6455504 | 20130731 |
| Soybean |
Glyma08g20190.1 |
290 |
77.6 |
91.2 |
|
| LJGI |
gnl|LJGI|TC75730 |
496 |
87.2 |
87.2 |
similar to UniRef100_Q9M3Z5 Cluster: Lipoxygenase; n=1; Cicer arietinum|Rep: Lipoxygenase - Cicer arietinum (Chickpea) (Garbanzo), partial (93%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0126529.1 |
length: 170 aa. |
| IPR000907 |
Lipoxygenase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0016702 |
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen |
|
|
| Molecular Function |
GO:0046872 |
metal ion binding |
|
|
| Biological Process |
GO:0055114 |
oxidation-reduction process |
|
|
| HMMPanther |
PTHR11771 |
LIPOXYGENASE |
2.4e-78 |
1-170 |
| IPR013819 |
Lipoxygenase, C-terminal |
| Molecular Function |
GO:0016702 |
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen |
|
|
| Molecular Function |
GO:0046872 |
metal ion binding |
|
|
| Biological Process |
GO:0055114 |
oxidation-reduction process |
|
|
| HMMPfam |
PF00305 |
Lipoxygenase |
9.4e-67 |
1-154 |
| ProfileScan |
PS51393 |
LIPOXYGENASE_3 |
80.050 |
1-170 |
| superfamily |
SSF48484 |
Lipoxigenase |
5.9e-66 |
1-170 |
| no_ID |
|
| Gene3D |
G3DSA:1.20.245.10 |
no description |
1.9e-57 |
1-170 |
| HMMPanther |
PTHR11771:SF2 |
LIPOXYGENASE |
2.4e-78 |
1-170 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
7 |
29 |
- Wolf-PSORT
Lj0g3v0126529.1 chlo 3, nucl 3, cyto 2.5, nucl_plas 2.5, plas 2, cysk_nucl 2, cyto_E.R. 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0126529.1 |
|