Miyakogusa Predicted Gene

Lj0g3v0126429.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K370_SOYBN 824 77.0 82.6 (tr|I1K370) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT5G44790.1 728 66.1 75.8 | Symbols: RAN1, HMA7 | copper-exporting ATPase / responsive-to-antagonist 1 / copper-transporting ATPase (RAN1) | chr5:18075846-18079817 REVERSE LENGTH=1001
Medicago Medtr4g094695.1 857 79.0 84.3 | heavy metal P-type ATPase | HC | chr4:38743754-38750293 | 20130731
Soybean Glyma05g26330.1 824 77.0 82.6  
LJGI gnl|LJGI|TC60130 1477 100.0 100.0 similar to UniRef100_Q94KD6 Cluster: AT5g44790/K23L20_14; n=1; Arabidopsis thaliana|Rep: AT5g44790/K23L20_14 - Arabidopsis thaliana (Mouse-ear cress), partial (29%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0126429.1 length: 553 aa.
IPR001757 Cation-transporting P-type ATPase
method AccNumber shortName E-value location
Biological Process GO:0006812 cation transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0019829 cation-transporting ATPase activity    
HMMPanther PTHR24093 FAMILY 1.6e-171 90-553
IPR006121 Heavy metal-associated domain, HMA
Biological Process GO:0030001 metal ion transport    
Molecular Function GO:0046872 metal ion binding    
HMMPfam PF00403 HMA 1.5e-12 46-106
131-191
ProfileScan PS50846 HMA_2 21.175 43-109
128-194
superfamily SSF55008 HMA, 5.8e-06 40-114
125-198
193-276
IPR006122 Heavy metal-associated domain, copper ion-binding
Molecular Function GO:0005507 copper ion binding    
Biological Process GO:0006825 copper ion transport    
HMMTigr TIGR00003 TIGR00003: 4e-10 44-107
130-191
IPR008250 P-type ATPase, A domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0046872 metal ion binding    
Gene3D G3DSA:2.70.150.10 no description 2e-28 363-537
HMMPfam PF00122 E1-E2_ATPase 1.8e-29 402-551
IPR017969 Heavy-metal-associated, conserved site
Biological Process GO:0030001 metal ion transport    
Molecular Function GO:0046872 metal ion binding    
PatternScan PS01047 HMA_1 NA 48-78
133-162
IPR027183 Copper-transporting P-type ATPase
Biological Process GO:0006825 copper ion transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0043682 copper-transporting ATPase activity    
HMMPanther PTHR24093:SF42 SUBFAMILY 1.6e-171 90-553
no_ID  
FPrintScan PR00942 CUATPASEI 1.4e-08 43-68
69-92
98-118
Gene3D G3DSA:3.30.70.100 no description 2.5e-20 42-112
130-200
Seg seg seg NA 195-215
290-305
superfamily SSF81653 Calcium 1.5e-23 432-536
Putative transmembrane regions
  From To
TM segments
SOSUI		 294 316
335 357
365 387
398 418
Wolf-PSORT
Lj0g3v0126429.1	cyto 5, plas 3, chlo 2, E.R. 2, extr 1, vacu 1, chlo_mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0126429.1