Miyakogusa Predicted Gene

Lj0g3v0126059.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S769_LOTJA 456 84.5 84.5 (tr|I3S769) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G63260.2 346 62.9 72.3 | Symbols: TET10 | tetraspanin10 | chr1:23466975-23468945 REVERSE LENGTH=258
Medicago Medtr8g097280.1 368 75.7 82.6 | tetraspanin family protein | HC | chr8:40749643-40746704 | 20130731
Soybean Glyma08g01550.2 416 75.8 81.1  
LJGI gnl|LJGI|TC59989 1576 100.0 100.0 similar to UniRef100_A7QKJ6 Cluster: Chromosome chr2 scaffold_112, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_112, whole genome shotgun sequence - Vitis vinifera (Grape), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0126059.1 length: 264 aa.
IPR000301 Tetraspanin
method AccNumber shortName E-value location
Cellular Component GO:0016021 integral to membrane    
FPrintScan PR00259 TMFOUR 1e-07 8-31
39-65
66-94
IPR018499 Tetraspanin/Peripherin
Cellular Component GO:0016021 integral to membrane    
HMMPfam PF00335 Tetraspannin 2.3e-34 8-256
no_ID  
HMMPanther PTHR32191 FAMILY 1.6e-166 3-263
HMMPanther PTHR32191:SF3 SUBFAMILY 1.6e-166 3-263
Seg seg seg NA 70-96
231-243
Putative transmembrane regions
  From To
TM segments
SOSUI		 8 29
41 63
76 98
230 252
Wolf-PSORT
Lj0g3v0126059.1	plas 7, chlo 2, E.R. 2, golg 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0126059.1