Miyakogusa Predicted Gene

Lj0g3v0125939.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B9R7N6_RICCO 380 75.2 83.2 (tr|B9R7N6) Multidrug resistance pump, putative OS=Ricinus communis GN=RCOM_1593370 PE=4 SV=1
TAIR_pep AT1G47530.1 338 73.7 83.5 | Symbols: | MATE efflux family protein | chr1:17451724-17454110 FORWARD LENGTH=484
Medicago Medtr1g021740.1 363 75.8 85.3 | MATE efflux family protein | HC | chr1:6589072-6584225 | 20130731
Soybean Glyma18g20820.1 294 63.9 74.9  
LJGI gnl|LJGI|AV776569 1201 100.0 100.0 similar to UniRef100_A7NTK1 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), partial (42%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0125939.1 length: 250 aa.
IPR002528 Multi antimicrobial extrusion protein
method AccNumber shortName E-value location
Biological Process GO:0006855 drug transmembrane transport    
Molecular Function GO:0015238 drug transmembrane transporter activity    
Molecular Function GO:0015297 antiporter activity    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF01554 MatE 9.2e-33 41-201
no_ID  
HMMPanther PTHR11206 MULTIDRUG 5.9e-110 16-249
HMMPanther PTHR11206:SF21 MATE 5.9e-110 16-249
Seg seg seg NA 5-19
Putative transmembrane regions
  From To
TM segments
SOSUI		 38 60
71 93
118 140
152 174
188 210
224 246
Wolf-PSORT
Lj0g3v0125939.1	plas 7, nucl_plas 5, chlo 2, cyto 2, vacu 1, pero 1, chlo_mito 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0125939.1