Miyakogusa Predicted Gene

Lj0g3v0125449.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7K4Q1_MEDTR 1345 81.9 90.0 (tr|G7K4Q1) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_5g095690 PE=4 SV=1
TAIR_pep AT5G13230.1 911 56.0 73.7 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:4222514-4224982 FORWARD LENGTH=822
Medicago Medtr5g095690.1 1345 81.9 90.0 | pentatricopeptide (PPR) repeat protein | HC | chr5:41831683-41828172 | 20130731
Soybean Glyma07g19750.1 1201 76.3 84.1  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0125449.1 length: 820 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.017 81-105
184-204
212-241
386-407
487-512
587-610
HMMPfam PF13041 PPR_2 7e-11 310-358
412-459
515-560
HMMTigr TIGR00756 PPR: 2.3e-08 212-245
414-447
487-512
515-548
ProfileScan PS51375 PPR 7.498 43-77
109-143
78-108
210-244
179-209
144-178
311-345
280-310
412-446
381-411
346-380
513-547
482-512
447-481
548-583
584-618
650-684
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 4.5e-06 613-650
no_ID  
HMMPanther PTHR24015 FAMILY 0 185-820
HMMPanther PTHR24015:SF154SUBFAMILY NOT 0 185-820
HMMPfam PF14432 DYW_deaminase 7.6e-15 698-810
Seg seg seg NA 22-38
Wolf-PSORT
Lj0g3v0125449.1	chlo 10, E.R. 2, mito 1, cysk_nucl 1, E.R._vacu 1, E.R._plas 1, cyto_E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0125449.1