Miyakogusa Predicted Gene

Lj0g3v0125289.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KWK9_SOYBN 2751 87.9 92.0 (tr|K7KWK9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G51200.1 2035 65.5 79.9 | Symbols: | Protein of unknown function (DUF3414) | chr5:20804926-20819408 FORWARD LENGTH=1838
Medicago Medtr7g099880.1 2690 86.1 90.9 | nuclear pore complex Nup205-like protein | HC | chr7:40140621-40114841 | 20130731
Soybean Glyma06g29610.1 1410 83.8 88.0  
LJGI gnl|LJGI|FS320487 854 99.5 99.5 similar to UniRef100_A7PF31 Cluster: Chromosome chr11 scaffold_13, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr11 scaffold_13, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0125289.2 length: 1539 aa.
IPR021827 Nucleoporin Nup186/Nup192/Nup205
method AccNumber shortName E-value location
Cellular Component GO:0005643 nuclear pore    
HMMPfam PF11894 DUF3414 1.2e-235 5-1526
no_ID  
HMMPanther PTHR31344 FAMILY 1.2e-81 4-1459
HMMPanther PTHR31344:SF0 SUBFAMILY 1.2e-81 4-1459
Seg seg seg NA 689-700
1262-1276
1337-1348
Putative transmembrane regions
  From To
TM segments
SOSUI		 258 280
Wolf-PSORT
Lj0g3v0125289.2	chlo 10, plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0125289.2