Miyakogusa Predicted Gene

Lj0g3v0125239.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1N0S6_SOYBN 358 70.8 76.3 (tr|I1N0S6) Uncharacterized protein OS=Glycine max PE=3 SV=2
TAIR_pep AT4G16630.1 314 59.8 68.6 | Symbols: | DEA(D/H)-box RNA helicase family protein | chr4:9362176-9366449 REVERSE LENGTH=789
Medicago Medtr3g049990.1 326 64.5 71.1 | DEAD-box ATP-dependent RNA helicase | HC | chr3:19680414-19670656 | 20130731
Soybean Glyma18g11950.1 356 70.4 76.3  
LJGI gnl|LJGI|BW596008 793 97.9 97.9 similar to UniRef100_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28; n=1; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent RNA helicase 28 - Arabidopsis thaliana (Mouse-ear cress), partial (7%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0125239.1 length: 286 aa.
IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0008026 ATP-dependent helicase activity    
PatternScan PS00039 DEAD_ATP_HELICASE NA 274-282
IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0008026 ATP-dependent helicase activity    
HMMPfam PF00270 DEAD 4.1e-37 147-286
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
HMMSmart SM00487 DEAD-like 2.4e-24 142-286
ProfileScan PS51192 HELICASE_ATP_BIND_1 22.858 154-286
IPR014014 RNA helicase, DEAD-box type, Q motif
ProfileScan PS51195 Q_MOTIF 11.385 123-151
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.3e-49 112-286
no_ID  
Gene3D G3DSA:3.40.50.300 no description 2.9e-61 115-286
HMMPanther PTHR24031 FAMILY 1e-115 10-286
HMMPanther PTHR24031:SF93 PREDICTED 1e-115 10-286
Seg seg seg NA 13-35
76-86
94-108
264-276
Wolf-PSORT
Lj0g3v0125239.1	nucl 8, cyto 2, mito 2, plas 2, mito_plas 2, cyto_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0125239.1