Miyakogusa Predicted Gene

Lj0g3v0123879.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL G7KFQ2_MEDTR 292 77.8 90.3 (tr|G7KFQ2) Regulator of nonsense transcripts-like protein OS=Medicago truncatula GN=MTR_5g076440 PE=4 SV=1
TAIR_pep AT4G05540.1 224 61.0 79.1 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr4:2818776-2821065 REVERSE LENGTH=689
Medicago Medtr5g076440.1 291 77.8 90.3 | P-loop nucleoside triphosphate hydrolase superfamily protein | HC | chr5:32616775-32612603 | 20130731
Soybean Glyma14g38960.1 276 76.3 88.7  
LJGI gnl|LJGI|TC76384 973 98.8 98.8 weakly similar to UniRef100_A7QTT0 Cluster: Chromosome undetermined scaffold_171, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_171, whole genome shotgun sequence - Vitis vinifera (Grape), partial (28%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0123879.1 length: 190 aa.
IPR027417 P-loop containing nucleoside triphosphate hydrolase
method AccNumber shortName E-value location
superfamily SSF52540 P-loop 1.6e-16 1-178
no_ID  
Gene3D G3DSA:3.40.50.300 no description 0.00063 1-31
67-173
HMMPanther PTHR10887 DNA2/NAM7 5.3e-83 1-176
HMMPanther PTHR10887:SF236SUBFAMILY NOT 5.3e-83 1-176
HMMPfam PF13087 AAA_12 1.4e-50 1-175
Wolf-PSORT
Lj0g3v0123879.1	chlo 5, nucl 4, cyto 4, cyto_nucl 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0123879.1