Miyakogusa Predicted Gene
- Lj0g3v0123809.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7N2E2_SOYBN |
178 |
81.0 |
82.8 |
(tr|K7N2E2) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT3G23160.1 |
133 |
62.1 |
73.3 |
| Symbols: | Protein of unknown function (DUF668) | chr3:8260059-8261654 REVERSE LENGTH=531 |
| Medicago |
Medtr1g044135.1 |
161 |
73.3 |
80.2 |
| plant/T32M21-140 protein | HC | chr1:16548099-16550751 | 20130731 |
| Soybean |
Glyma10g33200.1 |
146 |
68.1 |
73.3 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0123809.1 |
length: 116 aa. |
| IPR021864 |
Protein of unknown function DUF3475 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF11961 |
DUF3475 |
4.3e-25 |
45-101 |
| no_ID |
|
| HMMPanther |
PTHR31371 |
FAMILY |
9.5e-22 |
4-116 |
| HMMPanther |
PTHR31371:SF0 |
SUBFAMILY |
9.5e-22 |
4-116 |
| Seg |
seg |
seg |
NA |
89-105 |
- Wolf-PSORT
Lj0g3v0123809.1 cyto 8, mito 4, cyto_nucl 4, cyto_pero 4, cyto_E.R. 4, cyto_plas 4
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0123809.1 |
|