Miyakogusa Predicted Gene
- Lj0g3v0123479.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1MFB8_SOYBN |
240 |
51.2 |
64.3 |
(tr|I1MFB8) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT4G12560.2 |
87.0 |
25.5 |
46.7 |
| Symbols: CPR30 | F-box and associated interaction domains-containing protein | chr4:7441815-7443157 FORWARD LENGTH=413 |
| Medicago |
Medtr2g021190.1 |
239 |
48.0 |
63.9 |
| F-box protein interaction domain protein | HC | chr2:7169701-7168089 | 20130731 |
| Soybean |
Glyma15g10860.1 |
239 |
51.2 |
64.3 |
|
| LJGI |
gnl|LJGI|BW621082 |
266 |
99.3 |
99.3 |
similar to UniRef100_Q2HWB4 Cluster: Cyclin-like F-box; F-box protein interaction domain; n=1; Medicago truncatula|Rep: Cyclin-like F-box; F-box protein interaction domain - Medicago truncatula (Barrel medic), partial (9%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0123479.1 |
length: 288 aa. |
| IPR006527 |
F-box associated domain, type 1 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF07734 |
FBA_1 |
3.9e-06 |
138-282 |
| IPR017451 |
F-box associated interaction domain |
| HMMTigr |
TIGR01640 |
F_box_assoc_1: |
1.9e-33 |
21-255 |
- Wolf-PSORT
Lj0g3v0123479.1 nucl 5, cyto 3, nucl_plas 3, chlo 2, cysk 2, cyto_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0123479.1 |
|