Miyakogusa Predicted Gene

Lj0g3v0122989.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KWI1_SOYBN 1219 80.9 87.8 (tr|K7KWI1) DNA-directed RNA polymerase OS=Glycine max PE=3 SV=1
TAIR_pep AT2G24120.1 1009 65.8 79.7 | Symbols: PDE319, SCA3 | DNA/RNA polymerases superfamily protein | chr2:10249358-10254530 REVERSE LENGTH=993
Medicago Medtr8g065900.1 736 61.9 77.0 | DNA-directed RNA polymerase-like protein | HC | chr8:27401434-27394114 | 20130731
Soybean Glyma17g07940.1 1146 76.1 85.9  
LJGI gnl|LJGI|FS324084 301 100.0 100.0 similar to UniRef100_A7PFM9 Cluster: DNA-directed RNA polymerase; n=1; Vitis vinifera|Rep: DNA-directed RNA polymerase - Vitis vinifera (Grape), partial (6%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0122989.1 length: 732 aa.
IPR002092 DNA-directed RNA polymerase, phage-type
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003899 DNA-directed RNA polymerase activity    
Biological Process GO:0006351 transcription, DNA-dependent    
HMMPanther PTHR10102 DNA-DIRECTED 1.2e-281 2-728
HMMPfam PF00940 RNA_pol 4e-101 460-729
PatternScan PS00489 RNA_POL_PHAGE_2 NA 621-635
PatternScan PS00900 RNA_POL_PHAGE_1 NA 548-559
IPR024075 DNA-directed RNA polymerase, helix hairpin domain
Molecular Function GO:0003899 DNA-directed RNA polymerase activity    
Gene3D G3DSA:1.10.287.260 no description 2.1e-23 338-420
no_ID  
Coil coil coiled-coil NA 18-49
68-89
148-169
Gene3D G3DSA:1.10.1320.10 no description 1.5e-84 11-337
Gene3D G3DSA:1.10.150.20 no description 2.5e-55 585-729
Gene3D G3DSA:1.10.287.280 no description 9e-30 460-540
Gene3D G3DSA:3.30.70.370 no description 4.8e-29 542-584
Seg seg seg NA 29-47
275-286
superfamily SSF56672 DNA/RNA 5e-212 14-732
Wolf-PSORT
Lj0g3v0122989.1	cyto 8, nucl 3, chlo 2, cysk_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0122989.1