Miyakogusa Predicted Gene

Lj0g3v0122739.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7J2D6_MEDTR 256 40.5 57.2 (tr|G7J2D6) F-box/FBD/LRR-repeat protein OS=Medicago truncatula GN=MTR_3g071850 PE=4 SV=1
TAIR_pep AT1G32375.1 105 27.5 43.8 | Symbols: | F-box/RNI-like/FBD-like domains-containing protein | chr1:11679230-11680679 FORWARD LENGTH=422
Medicago Medtr3g071850.1 255 40.5 57.2 | F-box/RNI/FBD-like domain protein | LC | chr3:32243472-32238086 | 20130731
Soybean Glyma08g46590.2 189 36.9 52.0  
LJGI gnl|LJGI|TC77884 547 95.9 95.9  
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0122739.1 length: 398 aa.
IPR001810 F-box domain, cyclin-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 1.1e-06 13-47
HMMSmart SM00256 A 3.7e-05 16-57
ProfileScan PS50181 FBOX 10.345 10-58
superfamily SSF81383 F-box 2.1e-09 11-49
IPR006566 FBD
HMMPfam PF08387 FBD 1e-08 312-363
HMMSmart SM00579 domain 5.5e-07 321-395
no_ID  
Gene3D G3DSA:3.80.10.10 no description 2.4e-11 8-197
HMMPanther PTHR32484 FAMILY 3.4e-34 1-392
superfamily SSF52047 RNI-like 2.8e-08 103-386
Putative transmembrane regions
  From To
TM segments
SOSUI		 269 291
Wolf-PSORT
Lj0g3v0122739.1	nucl 6, cyto 5, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0122739.1