Miyakogusa Predicted Gene
- Lj0g3v0122319.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7LF30_MEDTR |
152 |
67.0 |
79.8 |
(tr|G7LF30) Resistance protein OS=Medicago truncatula GN=MTR_8g011950 PE=4 SV=1 |
| TAIR_pep |
AT5G46470.1 |
99.0 |
41.0 |
63.8 |
| Symbols: RPS6 | disease resistance protein (TIR-NBS-LRR class) family | chr5:18842701-18846809 FORWARD LENGTH=1127 |
| Medicago |
Medtr8g011725.1 |
150 |
67.0 |
79.8 |
| disease resistance protein (TIR-NBS-LRR class) | LC | chr8:3265595-3261947 | 20130731 |
| Soybean |
Glyma16g10340.1 |
139 |
56.6 |
76.4 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0122319.1 |
length: 106 aa. |
| IPR000157 |
Toll/interleukin-1 receptor homology (TIR) domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005515 |
protein binding |
|
|
| Biological Process |
GO:0007165 |
signal transduction |
|
|
| HMMPfam |
PF01582 |
TIR |
3.1e-17 |
2-81 |
| ProfileScan |
PS50104 |
TIR |
13.839 |
1-87 |
| superfamily |
SSF52200 |
Toll/Interleukin |
1.9e-17 |
2-90 |
| no_ID |
|
| Gene3D |
G3DSA:3.40.50.10140 |
no description |
1.2e-07 |
2-59 |
| HMMPanther |
PTHR11017 |
LEUCINE-RICH |
1.9e-31 |
2-106 |
| HMMPanther |
PTHR11017:SF130DISEASE |
RESISTANCE |
1.9e-31 |
2-106 |
- Wolf-PSORT
Lj0g3v0122319.1 chlo 9, cyto 3, nucl 1, extr 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0122319.1 |
|