Miyakogusa Predicted Gene

Lj0g3v0121809.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KV64_MEDTR 283 67.3 76.8 (tr|G7KV64) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_7g082550 PE=4 SV=1
TAIR_pep AT2G37320.1 140 35.9 52.3 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr2:15667223-15668725 FORWARD LENGTH=500
Medicago Medtr7g082550.1 283 67.3 76.8 | PPR containing plant-like protein | HC | chr7:31648795-31646693 | 20130731
Soybean Glyma17g06480.1 203 54.3 62.6  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0121809.1 length: 230 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.09 149-176
178-200
ProfileScan PS51375 PPR 9.240 144-178
no_ID  
HMMPanther PTHR24015 FAMILY 3.1e-28 71-228
HMMPanther PTHR24015:SF39 PENTATRICOPEPTIDE 3.1e-28 71-228
Putative transmembrane regions
  From To
TM segments
SOSUI		 136 158
Wolf-PSORT
Lj0g3v0121809.1	chlo 8, extr 2, vacu 2, mito 1, E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0121809.1