Miyakogusa Predicted Gene
- Lj0g3v0121279.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
database |
Accession |
Score |
Iden (%) |
Posi (%) |
Definition |
TrEMBL |
K7MP75_SOYBN |
228 |
78.1 |
86.7 |
(tr|K7MP75) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
TAIR_pep |
AT1G67310.1 |
174 |
61.6 |
71.2 |
| Symbols: | Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains | chr1:25198182-25203126 REVERSE LENGTH=1016 |
Medicago |
Medtr3g085050.2 |
201 |
70.3 |
83.6 |
| calmodulin-binding; transcription regulators protein | HC | chr3:38424643-38433914 | 20130731 |
Soybean |
Glyma11g36930.1 |
213 |
75.0 |
85.5 |
|
LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0121279.1 |
length: 129 aa. |
IPR005559 |
CG-1 DNA-binding domain |
method |
AccNumber |
shortName |
E-value |
location |
Molecular Function |
GO:0003677 |
DNA binding |
|
|
Cellular Component |
GO:0005634 |
nucleus |
|
|
HMMPfam |
PF03859 |
CG-1 |
6.5e-51 |
12-128 |
HMMSmart |
SM01076 |
no description |
4.5e-64 |
12-129 |
ProfileScan |
PS51437 |
CG_1 |
74.742 |
9-129 |
no_ID |
|
HMMPanther |
PTHR23335 |
CALMODULIN-BINDING |
1e-67 |
6-128 |
Seg |
seg |
seg |
NA |
51-63 |
- Wolf-PSORT
Lj0g3v0121279.1 cyto 9, mito 2, nucl 1, cysk 1, golg 1, chlo_mito 1, cyto_mito 1, cysk_nucl 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
Lj0g3v0121279.1 |
|