Miyakogusa Predicted Gene

Lj0g3v0120889.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7M407_SOYBN 900 88.1 93.7 (tr|K7M407) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT1G15960.1 787 78.7 87.1 | Symbols: NRAMP6, ATNRAMP6 | NRAMP metal ion transporter 6 | chr1:5482202-5485066 REVERSE LENGTH=527
Medicago Medtr2g104990.3 896 88.5 93.1 | NRAMP metal ion transporter 6 | HC | chr2:45254857-45250032 | 20130731
Soybean Glyma13g44710.1 901 88.1 93.7  
LJGI gnl|LJGI|TC61046 1227 99.8 99.8 similar to UniRef100_A7QA54 Cluster: Chromosome undetermined scaffold_69, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_69, whole genome shotgun sequence - Vitis vinifera (Grape), partial (45%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0120889.1 length: 494 aa.
IPR001046 Natural resistance-associated macrophage like
method AccNumber shortName E-value location
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
FPrintScan PR00447 NATRESASSCMP 1.6e-66 76-102
104-123
129-150
179-202
289-308
317-334
349-368
HAMAP MF_00221 NRAMP 38.984 1-405
HMMPanther PTHR11706 MANGANESE 0 1-494
HMMPfam PF01566 Nramp 5.7e-127 17-379
HMMTigr TIGR01197 nramp: 4.5e-123 1-373
no_ID  
HMMPanther PTHR11706:SF10 METAL 0 1-494
Seg seg seg NA 109-124
Putative transmembrane regions
  From To
TM segments
SOSUI		 34 56
69 91
100 122
132 152
223 245
279 301
319 341
346 367
382 404
418 440
Wolf-PSORT
Lj0g3v0120889.1	plas 7, vacu 3, cyto 2, E.R._vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0120889.1