Miyakogusa Predicted Gene

Lj0g3v0119529.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL K7LDZ6_SOYBN 815 76.4 80.3 (tr|K7LDZ6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G23030.1 570 68.4 81.4 | Symbols: | MATE efflux family protein | chr4:12072857-12074365 FORWARD LENGTH=502
Medicago Medtr1g101500.1 774 75.0 83.1 | MATE efflux family protein | HC | chr1:45846923-45844940 | 20130731
Soybean Glyma10g38390.1 798 78.1 84.3  
LJGI gnl|LJGI|AV417402 89.7 92.3 92.3 similar to UniRef100_A7QVK5 Cluster: Chromosome chr16 scaffold_189, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_189, whole genome shotgun sequence - Vitis vinifera (Grape), partial (23%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0119529.1 length: 539 aa.
IPR002528 Multi antimicrobial extrusion protein
method AccNumber shortName E-value location
Biological Process GO:0006855 drug transmembrane transport    
Molecular Function GO:0015238 drug transmembrane transporter activity    
Molecular Function GO:0015297 antiporter activity    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF01554 MatE 4.2e-35 74-233
295-457
HMMTigr TIGR00797 matE: 2.7e-64 74-471
no_ID  
HMMPanther PTHR11206 MULTIDRUG 4.9e-232 12-515
HMMPanther PTHR11206:SF21 MATE 4.9e-232 12-515
Seg seg seg NA 42-54
468-479
523-535
Putative transmembrane regions
  From To
TM segments
SOSUI
66 88
106 128
145 167
215 237
246 268
283 305
319 341
366 388
443 465
471 492
Wolf-PSORT
Lj0g3v0119529.1	plas 6, nucl 2, cyto 2, E.R. 2, cyto_nucl 2, cyto_E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0119529.1