Miyakogusa Predicted Gene

Lj0g3v0118009.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KVS9_SOYBN 356 80.0 85.5 (tr|K7KVS9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G27500.1 285 67.3 79.5 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:9551629-9553654 REVERSE LENGTH=650
Medicago Medtr3g077950.1 351 79.5 85.0 | kinesin light chain | HC | chr3:35117836-35113958 | 20130731
Soybean Glyma06g19430.1 355 80.0 85.5  
LJGI gnl|LJGI|BP066990 559 100.0 100.0 similar to UniRef100_A7PD12 Cluster: Chromosome chr17 scaffold_12, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_12, whole genome shotgun sequence - Vitis vinifera (Grape), partial (26%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0118009.1 length: 220 aa.
IPR011990 Tetratricopeptide-like helical
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.8e-18 10-167
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 12.494 10-168
IPR013105 Tetratricopeptide TPR2
HMMPfam PF07719 TPR_2 0.0082 13-42
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 45 10-43
51-84
93-126
135-168
ProfileScan PS50005 TPR 7.523 10-43
51-84
93-126
135-168
no_ID  
Coil coil coiled-coil NA 16-44
176-197
HMMPanther PTHR19959 KINESIN 2.8e-49 1-218
HMMPanther PTHR19959:SF23 SUBFAMILY 2.8e-49 1-218
HMMPfam PF13424 TPR_12 2.7e-12 92-166
Seg seg seg NA 25-38
superfamily SSF48452 TPR-like 1e-13 6-167
Wolf-PSORT
Lj0g3v0118009.1	cyto 7, nucl 4, cyto_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0118009.1