Miyakogusa Predicted Gene

Lj0g3v0116329.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7K4K0_MEDTR 439 66.9 75.8 (tr|G7K4K0) Receptor-like kinase OS=Medicago truncatula GN=MTR_5g095120 PE=4 SV=1
TAIR_pep AT2G33020.1 228 40.6 57.4 | Symbols: AtRLP24, RLP24 | receptor like protein 24 | chr2:14013874-14016516 REVERSE LENGTH=864
Medicago Medtr5g095120.1 439 66.9 75.8 | receptor-like protein | LC | chr5:41569704-41573009 | 20130731
Soybean Glyma16g28480.1 432 66.3 73.8  
LJGI gnl|LJGI|TC63707 557 86.5 86.5 weakly similar to UniRef100_A7QK47 Cluster: Chromosome chr16 scaffold_110, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr16 scaffold_110, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0116329.1 length: 366 aa.
no_ID  
method AccNumber shortName E-value location
FPrintScan PR00019 LEURICHRPT 3.6e-05 42-55
214-227
Gene3D G3DSA:3.80.10.10 no description 7.7e-52 171-281
HMMPanther PTHR24420 FAMILY 2.4e-78 2-342
HMMPanther PTHR24420:SF480SUBFAMILY NOT 2.4e-78 2-342
HMMPfam PF13855 LRR_8 6.1e-07 16-76
193-251
Seg seg seg NA 348-358
superfamily SSF52058 L 4.2e-52 1-284
Putative transmembrane regions
  From To
TM segments
SOSUI		 311 333
Wolf-PSORT
Lj0g3v0116329.1	nucl 5, mito 3, chlo 2, cyto 2, extr 1, pero 1, cyto_E.R. 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0116329.1