Miyakogusa Predicted Gene
- Lj0g3v0115719.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7MQ17_SOYBN |
254 |
58.8 |
66.1 |
(tr|K7MQ17) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT2G30505.1 |
87.0 |
28.6 |
47.1 |
| Symbols: | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family | chr2:13001121-13002086 REVERSE LENGTH=321 |
| Medicago |
Medtr3g062470.1 |
255 |
53.8 |
64.5 |
| transmembrane protein, putative | HC | chr3:28210208-28208789 | 20130731 |
| Soybean |
Glyma18g05750.1 |
236 |
65.6 |
71.6 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0115719.1 |
length: 202 aa. |
| IPR004864 |
Late embryogenesis abundant protein, LEA-14 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF03168 |
LEA_2 |
1.3e-06 |
77-164 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
36-47 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
31 |
53 |
- Wolf-PSORT
Lj0g3v0115719.1 cyto 9, E.R. 2, chlo 1, nucl 1, pero 1, E.R._vacu 1, E.R._plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0115719.1 |
|