Miyakogusa Predicted Gene

Lj0g3v0115609.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1L482_SOYBN 518 78.5 86.5 (tr|I1L482) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G52450.1 419 71.5 84.7 | Symbols: | MATE efflux family protein | chr5:21289042-21291749 REVERSE LENGTH=486
Medicago Medtr6g081410.1 501 80.0 89.8 | MATE efflux family protein | HC | chr6:30489199-30482425 | 20130731
Soybean Glyma09g31030.1 518 78.5 86.5  
LJGI gnl|LJGI|TC69358 1124 100.0 100.0 similar to UniRef100_A7PH11 Cluster: Chromosome chr17 scaffold_16, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr17 scaffold_16, whole genome shotgun sequence - Vitis vinifera (Grape), partial (30%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0115609.1 length: 325 aa.
IPR002528 Multi antimicrobial extrusion protein
method AccNumber shortName E-value location
Biological Process GO:0006855 drug transmembrane transport    
Molecular Function GO:0015238 drug transmembrane transporter activity    
Molecular Function GO:0015297 antiporter activity    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF01554 MatE 5.3e-33 54-214
HMMTigr TIGR00797 matE: 8.7e-62 54-324
no_ID  
HMMPanther PTHR11206 MULTIDRUG 4.3e-158 33-324
HMMPanther PTHR11206:SF21 MATE 4.3e-158 33-324
Putative transmembrane regions
  From To
TM segments
SOSUI		 51 73
82 104
131 153
162 184
199 221
226 248
270 292
302 324
Wolf-PSORT
Lj0g3v0115609.1	cyto 5, plas 3, cyto_E.R. 3, nucl 2, vacu 2, E.R._plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0115609.1