Miyakogusa Predicted Gene
- Lj0g3v0115009.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7KPL3_MEDTR |
346 |
78.8 |
87.4 |
(tr|G7KPL3) Thioredoxin domain-containing protein OS=Medicago truncatula GN=MTR_6g029240 PE=4 SV=1 |
| TAIR_pep |
AT3G03860.1 |
218 |
50.2 |
70.1 |
| Symbols: ATAPRL5, APRL5 | APR-like 5 | chr3:992465-994315 FORWARD LENGTH=300 |
| Medicago |
Medtr6g029240.1 |
346 |
78.8 |
87.4 |
| 5-adenylylsulfate reductase-like protein | HC | chr6:10053541-10059871 | 20130731 |
| Soybean |
Glyma19g28980.1 |
301 |
72.3 |
80.9 |
|
| LJGI |
gnl|LJGI|TC76149 |
934 |
100.0 |
100.0 |
similar to UniRef100_A7PW43 Cluster: Chromosome chr8 scaffold_34, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_34, whole genome shotgun sequence - Vitis vinifera (Grape), partial (29%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0115009.1 |
length: 224 aa. |
| IPR012336 |
Thioredoxin-like fold |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.40.30.10 |
no description |
1.8e-07 |
3-81 |
| superfamily |
SSF52833 |
Thioredoxin-like |
5.7e-10 |
3-81 |
| IPR013766 |
Thioredoxin domain |
| Biological Process |
GO:0045454 |
cell redox homeostasis |
|
|
| HMMPfam |
PF00085 |
Thioredoxin |
6.1e-06 |
3-69 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
122 |
143 |
- Wolf-PSORT
Lj0g3v0115009.1 chlo 8, nucl 2, E.R. 2, cyto 1, mito 1, cysk_nucl 1, nucl_plas 1, E.R._vacu 1, E.R._plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0115009.1 |
|