Miyakogusa Predicted Gene

Lj0g3v0114919.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1N313_SOYBN 974 62.2 73.5 (tr|I1N313) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G05650.1 347 30.8 45.1 | Symbols: AtRLP32, RLP32 | receptor like protein 32 | chr3:1645884-1648490 REVERSE LENGTH=868
Medicago Medtr2g078260.1 871 52.9 65.8 | verticillium wilt disease resistance protein | HC | chr2:32546862-32549657 | 20130731
Soybean Glyma18g43630.1 921 63.3 74.8  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0114919.1 length: 933 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.68 174-195
245-270
367-386
485-502
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 2.4e+02 99-123
147-170
171-196
243-266
294-318
319-340
342-365
750-773
774-797
798-831
IPR013210 Leucine-rich repeat-containing N-terminal, type 2
HMMPfam PF08263 LRRNT_2 3.6e-07 38-72
IPR025875 Leucine rich repeat 4
HMMPfam PF12799 LRR_4 1e-08 124-161
no_ID  
FPrintScan PR00019 LEURICHRPT 5.2e-05 368-381
774-787
Gene3D G3DSA:3.80.10.10 no description 4.2e-60 30-309
316-446
731-840
HMMPanther PTHR24420 FAMILY 5.7e-142 81-880
HMMPanther PTHR24420:SF480SUBFAMILY NOT 5.7e-142 81-880
HMMPfam PF13516 LRR_6 1 555-576
HMMPfam PF13855 LRR_8 1.6e-06 754-811
Seg seg seg NA 91-107
145-156
311-325
521-531
533-545
886-897
superfamily SSF52047 RNI-like 1.5e-58 79-403
superfamily SSF52058 L 3.4e-64 433-844
Putative transmembrane regions
  From To
TM segments
SOSUI		 8 30
870 891
Wolf-PSORT
Lj0g3v0114919.1	plas 10, vacu 2, E.R. 1, golg 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0114919.1