Miyakogusa Predicted Gene
- Lj0g3v0114849.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7I9F1_MEDTR |
346 |
84.0 |
89.5 |
(tr|G7I9F1) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_1g083750 PE=4 SV=1 |
| TAIR_pep |
AT1G09160.1 |
325 |
78.5 |
86.0 |
| Symbols: | Protein phosphatase 2C family protein | chr1:2953199-2955059 REVERSE LENGTH=428 |
| Medicago |
Medtr1g083750.1 |
346 |
84.0 |
89.5 |
| protein phosphatase 2C family protein | HC | chr1:37280425-37276915 | 20130731 |
| Soybean |
Glyma10g29060.1 |
342 |
82.5 |
89.5 |
|
| LJGI |
gnl|LJGI|FS338745 |
809 |
98.8 |
98.8 |
similar to UniRef100_Q2HW27 Cluster: Protein phosphatase 2C-like; n=1; Medicago truncatula|Rep: Protein phosphatase 2C-like - Medicago truncatula (Barrel medic), partial (31%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0114849.1 |
length: 216 aa. |
| IPR001932 |
Protein phosphatase 2C (PP2C)-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Gene3D |
G3DSA:3.60.40.10 |
no description |
7.2e-31 |
39-201 |
| HMMPfam |
PF00481 |
PP2C |
1.1e-21 |
64-194 |
| HMMSmart |
SM00332 |
Serine/threonine |
1e-09 |
25-209 |
| superfamily |
SSF81606 |
PP2C-like |
2.6e-27 |
13-192 |
| IPR015655 |
Protein phosphatase 2C |
| HMMPanther |
PTHR13832 |
PROTEIN |
5.3e-117 |
1-203 |
| no_ID |
|
| HMMPanther |
PTHR13832:SF157PROTEIN |
PHOSPHATASE |
5.3e-117 |
1-203 |
| Seg |
seg |
seg |
NA |
176-185 |
- Wolf-PSORT
Lj0g3v0114849.1 chlo 7, vacu 2, nucl 1, cyto 1, mito 1, plas 1, extr 1, cyto_nucl 1, nucl_plas 1, E.R._vacu 1, mito_plas 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0114849.1 |
|