Miyakogusa Predicted Gene

Lj0g3v0114629.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1KTK7_SOYBN 2245 82.2 86.8 (tr|I1KTK7) Clustered mitochondria protein homolog OS=Glycine max PE=3 SV=2
TAIR_pep AT3G52140.1 1764 66.8 76.3 | Symbols: | tetratricopeptide repeat (TPR)-containing protein | chr3:19333232-19341295 FORWARD LENGTH=1403
Medicago Medtr3g027610.1 2148 81.8 86.1 | eukaryotic translation initiation factor 3 subunit, putative | HC | chr3:8657899-8672705 | 20130731
Soybean Glyma15g42670.1 2152 80.5 84.3  
LJGI gnl|LJGI|TC76526 2026 99.0 99.0 similar to UniRef100_A7QWW8 Cluster: Chromosome chr13 scaffold_210, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_210, whole genome shotgun sequence - Vitis vinifera (Grape), partial (18%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0114629.1 length: 1312 aa.
IPR007967 Protein of unknown function DUF727
method AccNumber shortName E-value location
HMMPfam PF05303 DUF727 0.00018 160-227
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 4.1e-17 907-1116
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 11.181 992-1067
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 0.097 908-941
992-1025
1034-1067
ProfileScan PS50005 TPR 9.086 908-941
992-1025
1034-1067
IPR023231 GSKIP/TIF31 domain
superfamily SSF103107 Hypothetical 9.1e-25 101-239
IPR025697 CLU domain
HMMPfam PF13236 CLU 6.9e-47 281-372
420-564
IPR027523 Clustered mitochondria protein
Biological Process GO:0048312 intracellular distribution of mitochondria    
HAMAP MF_03013 CLU 9.296 1-1245
no_ID  
HMMPanther PTHR12601 EUKARYOTIC 0 1-1243
HMMPanther PTHR12601:SF6 SUBFAMILY 0 1-1243
HMMPfam PF12807 eIF3_p135 9.6e-52 692-880
HMMPfam PF13424 TPR_12 7.8e-16 988-1062
Seg seg seg NA 74-90
123-134
589-598
1168-1184
1202-1218
1301-1312
superfamily SSF48452 TPR-like 6.1e-13 905-1105
Wolf-PSORT
Lj0g3v0114629.1	nucl 8, cyto 3, chlo 1, plas 1, cysk 1, cysk_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0114629.1