Miyakogusa Predicted Gene
- Lj0g3v0114409.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1N909_SOYBN |
361 |
64.3 |
75.7 |
(tr|I1N909) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT3G44670.2 |
75.9 |
30.4 |
49.4 |
| Symbols: | Disease resistance protein (TIR-NBS-LRR class) family | chr3:16217242-16221425 FORWARD LENGTH=1219 |
| Medicago |
Medtr7g091550.1 |
301 |
54.8 |
71.2 |
| NBS-LRR disease resistance protein | LC | chr7:36216856-36222349 | 20130731 |
| Soybean |
Glyma06g17560.1 |
340 |
62.2 |
74.3 |
|
| LJGI |
gnl|LJGI|TC61478 |
533 |
100.0 |
100.0 |
similar to UniRef100_A2Q3B4 Cluster: Disease resistance protein; Calcium-binding EF-hand; n=1; Medicago truncatula|Rep: Disease resistance protein; Calcium-binding EF-hand - Medicago truncatula (Barrel medic), partial (40%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0114409.1 |
length: 307 aa. |
| no_ID |
|
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.80.10.10 |
no description |
4.3e-27 |
40-300 |
| HMMPanther |
PTHR23155 |
LEUCINE-RICH |
7.6e-27 |
36-298 |
| HMMPfam |
PF13855 |
LRR_8 |
9.7e-09 |
45-102 |
| superfamily |
SSF52058 |
L |
1.7e-33 |
42-300 |
- Wolf-PSORT
Lj0g3v0114409.1 nucl 4, plas 3, mito 2.5, chlo 2, cyto_nucl 2, cyto_mito 2, cysk_nucl 2, golg_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0114409.1 |
|