Miyakogusa Predicted Gene

Lj0g3v0113949.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KB21_MEDTR 145 69.7 79.8 (tr|G7KB21) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_5g038580 PE=4 SV=1
TAIR_pep AT2G02750.1 87.0 47.7 67.0 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr2:771641-773482 REVERSE LENGTH=613
Medicago Medtr5g038580.1 145 69.7 79.8 | PPR containing plant-like protein | HC | chr5:16954387-16952525 | 20130731
Soybean Glyma02g02410.1 140 67.6 76.6  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0113949.1 length: 109 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF13041 PPR_2 1.3e-08 67-106
HMMTigr TIGR00756 PPR: 2.1e-05 69-103
ProfileScan PS51375 PPR 6.138 67-102
36-66
no_ID  
HMMPanther PTHR24015 FAMILY 1.5e-21 23-109
HMMPanther PTHR24015:SF76 SUBFAMILY 1.5e-21 23-109
Putative transmembrane regions
  From To
TM segments
SOSUI		 32 54
Wolf-PSORT
Lj0g3v0113949.1	chlo 10, nucl 1, cyto 1, mito 1, cyto_nucl 1, E.R._vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0113949.1