- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
M5XCR6_PRUPE |
202 |
66.0 |
73.7 |
(tr|M5XCR6) Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004055mg PE=4 SV=1 |
| TAIR_pep |
AT1G70280.2 |
179 |
68.3 |
84.9 |
| Symbols: | NHL domain-containing protein | chr1:26466086-26468471 REVERSE LENGTH=509 |
| Medicago |
Medtr6g007720.1 |
219 |
69.0 |
78.5 |
| NHL repeat protein | HC | chr6:1850293-1854343 | 20130731 |
| Soybean |
Glyma19g01410.1 |
192 |
70.4 |
78.6 |
|
| LJGI |
gnl|LJGI|TC79541 |
71.9 |
90.0 |
90.0 |
similar to UniRef100_A7Q2F1 Cluster: Chromosome chr1 scaffold_46, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_46, whole genome shotgun sequence - Vitis vinifera (Grape), partial (43%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0113419.1 |
length: 154 aa. |
| IPR011042 |
Six-bladed beta-propeller, TolB-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:2.120.10.30 |
no description |
2.5e-07 |
63-154 |
| no_ID |
|
| HMMPanther |
PTHR13833 |
FAMILY |
1.6e-59 |
17-154 |
| HMMPanther |
PTHR13833:SF16 |
NHL |
1.6e-59 |
17-154 |
| Seg |
seg |
seg |
NA |
11-28 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
1 |
20 |
| 28 |
50 |
- Wolf-PSORT
Lj0g3v0113419.1 chlo 10, mito 1, extr 1, vacu 1, E.R. 1, E.R._vacu 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0113419.1 |
|