Miyakogusa Predicted Gene
- Lj0g3v0113089.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr0
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1KNM8_SOYBN |
553 |
78.6 |
85.5 |
(tr|I1KNM8) Uncharacterized protein OS=Glycine max PE=3 SV=1 |
| TAIR_pep |
AT4G17180.1 |
498 |
68.4 |
78.9 |
| Symbols: | O-Glycosyl hydrolases family 17 protein | chr4:9646541-9648045 FORWARD LENGTH=475 |
| Medicago |
Medtr2g027560.1 |
505 |
74.8 |
85.0 |
| O-glycosyl hydrolase family 17 protein | HC | chr2:10093857-10091125 | 20130731 |
| Soybean |
Glyma07g39950.1 |
553 |
78.6 |
85.5 |
|
| LJGI |
gnl|LJGI|GO021099 |
246 |
80.9 |
80.9 |
similar to UniRef100_A2Q5H1 Cluster: Glycoside hydrolase, family 17; X8; n=1; Medicago truncatula|Rep: Glycoside hydrolase, family 17; X8 - Medicago truncatula (Barrel medic), partial (38%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj0g3v0113089.1 |
length: 499 aa. |
| IPR000490 |
Glycoside hydrolase, family 17 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004553 |
hydrolase activity, hydrolyzing O-glycosyl compounds |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| HMMPfam |
PF00332 |
Glyco_hydro_17 |
1.4e-71 |
86-402 |
| PatternScan |
PS00587 |
GLYCOSYL_HYDROL_F17 |
NA |
318-331 |
| IPR008979 |
Galactose-binding domain-like |
| Gene3D |
G3DSA:2.60.120.260 |
no description |
5.9e-06 |
403-470 |
| superfamily |
SSF49785 |
Galactose-binding |
7.9e-14 |
402-468 |
| IPR013781 |
Glycoside hydrolase, catalytic domain |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Biological Process |
GO:0005975 |
carbohydrate metabolic process |
|
|
| Gene3D |
G3DSA:3.20.20.80 |
no description |
5e-106 |
86-402 |
| IPR017853 |
Glycoside hydrolase, superfamily |
| superfamily |
SSF51445 |
(Trans)glycosidases |
3.1e-75 |
86-405 |
| no_ID |
|
| HMMPanther |
PTHR32227 |
FAMILY |
5.4e-215 |
49-401 |
| HMMPanther |
PTHR32227:SF11 |
SUBFAMILY |
5.4e-215 |
49-401 |
| Seg |
seg |
seg |
NA |
144-156 |
- Putative transmembrane regions
| |
From |
To |
TM segments
SOSUI |
59 |
81 |
| 124 |
146 |
- Wolf-PSORT
Lj0g3v0113089.1 vacu 7, extr 2, E.R. 2, nucl 1, plas 1, golg 1, nucl_plas 1, golg_plas 1, cyto_E.R. 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj0g3v0113089.1 |
|