Miyakogusa Predicted Gene

Lj0g3v0112789.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr0
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JLR0_MEDTR 885 80.5 88.5 (tr|G7JLR0) Pentatricopeptide repeat-containing protein OS=Medicago truncatula GN=MTR_4g133610 PE=4 SV=1
TAIR_pep AT5G37570.1 356 37.4 58.5 | Symbols: | Pentatricopeptide repeat (PPR-like) superfamily protein | chr5:14924494-14926146 REVERSE LENGTH=550
Medicago Medtr4g133610.1 887 81.3 89.0 | PPR containing plant-like protein | HC | chr4:55889196-55891282 | 20130731
Soybean Glyma02g38350.1 880 80.2 89.9  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj0g3v0112789.1 length: 592 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.00092 162-188
190-219
221-249
252-275
284-311
HMMPfam PF13041 PPR_2 4.4e-11 383-430
HMMTigr TIGR00756 PPR: 1.6e-07 221-249
252-275
285-317
385-418
ProfileScan PS51375 PPR 5.525 86-121
122-156
219-253
188-218
157-187
282-316
383-417
352-382
418-448
520-554
486-516
454-484
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 7.3e-08 448-540
no_ID  
HMMPanther PTHR24015 FAMILY 3.3e-183 1-562
HMMPanther PTHR24015:SF169PENTATRICOPEPTIDE (PPR) 3.3e-183 1-562
Seg seg seg NA 16-25
30-49
Wolf-PSORT
Lj0g3v0112789.1	chlo 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj0g3v0112789.1